Insertion junction: CLIP2.068862_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.068862
Chromosome:chromosome 5
Location:1894739
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g235900 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTTAGGGTAGGCGGTATGCTTGACCGCGTCACTTCGAACGACGGTACGTT
Internal bar code:CCAGATCTTGTAGGGTCGCGTA

Confirmation - LEAP-Seq

LEAP-Seq distance:215
LEAP-Seq percent confirming:1.66667
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:59
LEAP-Seq n unique pos:60

Suggested primers for confirmation by PCR

Suggested primer 1:GCGTGCTTTACCTATGCTGC
Suggested primer 2:AGCTTTACACGTCAAGCCGA