Insertion junction: CLIP2.068865_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.068865
Chromosome:chromosome 10
Location:4431617
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre10.g450550 PAO3,PAO1 Pheophorbide a oxygenase; (1 of 8) 1.14.12.20 - Pheophorbide a oxygenase / Pheide a oxygenase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCCCCCTGGCCTGTCGCTTCAAGCTGGGTGCAGCTGCGAGGCGGCCGCG
Internal bar code:AGTAGATACTGCTCCAGGTCGT

Confirmation - LEAP-Seq

LEAP-Seq distance:154
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:GCCTGCTATGCTCACAGCTA
Suggested primer 2:ACACGCCCTCATAGAACAGC