Insertion junction: CLIP2.068867_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.068867
Chromosome:chromosome 13
Location:1195708
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g569850 AMT4,AMT1D Ammonium transporter; (1 of 8) K03320 - ammonium transporter, Amt family (amt, AMT, MEP) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACAATGTGCGTTGTCATGTCGGCCTCAGATCCTCTCTCGCGCCCAACTCC
Internal bar code:CTCTGTGGTGTGTTTGGTCAGC

Confirmation - LEAP-Seq

LEAP-Seq distance:4859
LEAP-Seq percent confirming:89.1892
LEAP-Seq n confirming:66
LEAP-Seq n nonconfirming:8
LEAP-Seq n unique pos:74

Suggested primers for confirmation by PCR

Suggested primer 1:CCTCTCTTGTGTCTGTGCGT
Suggested primer 2:GCGCGTGAGTGAAACAAGTT