Insertion junction: CLIP2.068867_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.068867
Chromosome:chromosome 13
Location:1195708
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g569850 AMT4,AMT1D Ammonium transporter; (1 of 8) K03320 - ammonium transporter, Amt family (amt, AMT, MEP) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTTACTAATGGGACTGTACGTAAAGAACTTTTTGAGTTGATGGTATATCC
Internal bar code:CTTTTATCCGGAGGGAATAGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:2857
LEAP-Seq percent confirming:98.6301
LEAP-Seq n confirming:72
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:73

Suggested primers for confirmation by PCR

Suggested primer 1:GCGCGTGAGTGAAACAAGTT
Suggested primer 2:CCTCTCTTGTGTCTGTGCGT