Insertion junction: CLIP2.068876_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.068876
Chromosome:chromosome 13
Location:4053580
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g590750 HTB21,HTB37 (1 of 27) K11252 - histone H2B (H2B); Histone H2B 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGTTCAAGACCCCAGAACCCTACTTCAGCACATTCCTTATCGCAACCAT
Internal bar code:ATTCGAAAATACTAGTACGAAT

Confirmation - LEAP-Seq

LEAP-Seq distance:2488
LEAP-Seq percent confirming:76.9231
LEAP-Seq n confirming:20
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:26

Suggested primers for confirmation by PCR

Suggested primer 1:AGTCTGGATCTGGGTCTCCC
Suggested primer 2:TTGCCCTTCTTCAGGTAGCG