Insertion junction: CLIP2.068894_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.068894
Chromosome:chromosome 1
Location:3003914
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g018900 (1 of 1) K11971 - E3 ubiquitin-protein ligase RNF14 [EC:6.3.2.19] (RNF14, ARA54) 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCGCCCTAATCACCCTCCGAGCCCTGCCGCAGCAGCTGTGGCTGCTCCT
Internal bar code:GCACTAGTAGGATCGGTGGTGC

Confirmation - LEAP-Seq

LEAP-Seq distance:1355
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:CTTACTGGCCCCTCCTTTGG
Suggested primer 2:GACTGTAGCGCTAGAGCCTG