Insertion junction: CLIP2.068897_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.068897
Chromosome:chromosome 7
Location:3379032
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre07.g335100 (1 of 5) IPR011051//IPR013096 - RmlC-like cupin domain // Cupin 2, conserved barrel intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTATATGTTCGAAGGTCCTCTCGGGCCCTCGTGCTACTGGGCATGCCACC
Internal bar code:GCCCCCGGTCTCATTGATCGGA

Confirmation - LEAP-Seq

LEAP-Seq distance:2672
LEAP-Seq percent confirming:47.7612
LEAP-Seq n confirming:32
LEAP-Seq n nonconfirming:35
LEAP-Seq n unique pos:67

Suggested primers for confirmation by PCR

Suggested primer 1:CGTTATGCAGCCTTTCGTCG
Suggested primer 2:CAGCGAGTCAGATAGCCTGG