Insertion junction: CLIP2.068899_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.068899
Chromosome:chromosome 7
Location:1344402
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g322550 FAP240 Flagellar Associated Protein 240; (1 of 1) PF14977 - FAM194 protein (FAM194) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTAGCTCCAGACAAAAACGGCCGGGTGGCCGCCGTCTTTTGTCTGGGCAC
Internal bar code:ACTAGAAGATCAAGATAATACG

Confirmation - LEAP-Seq

LEAP-Seq distance:1859
LEAP-Seq percent confirming:90.0
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:CGCCATCGTCTCTCAGTACC
Suggested primer 2:GCAGAGCGGGATACAGACTC