Insertion junction: CLIP2.068899_3

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.068899
Chromosome:chromosome 12
Location:5830692
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g533201 (1 of 3) PF07452 - CHRD domain (CHRD) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGGAGGAACAAATCCCGTCAACGGCGGGACCGCGGCGGCTCCCAGGCCGC
Internal bar code:TGGGTGTCTACCATGTTGTGGC

Confirmation - LEAP-Seq

LEAP-Seq distance:220
LEAP-Seq percent confirming:13.6364
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:19
LEAP-Seq n unique pos:22

Suggested primers for confirmation by PCR

Suggested primer 1:TGGCATGCAAAGAGGTAGCA
Suggested primer 2:GTACACACGCACACACACAC