Insertion junction: CLIP2.068904_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.068904
Chromosome:chromosome 3
Location:4324480
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g800330 (1 of 32) IPR006502 - Protein of unknown function PDDEXK-like 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTTGTTGGAAGCGCTGGACCACGGCGACGACGGCTGGATCTCGATGGGCG
Internal bar code:GTGTTAACTTCACTCCTGGCAA

Confirmation - LEAP-Seq

LEAP-Seq distance:1042
LEAP-Seq percent confirming:66.6667
LEAP-Seq n confirming:14
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:21

Suggested primers for confirmation by PCR

Suggested primer 1:GCGCCAAACTTAGCCGTATG
Suggested primer 2:AACAGCGTACCTTGAGCTCC