Insertion junction: CLIP2.068918_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.068918
Chromosome:chromosome 2
Location:2052509
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g088651 3'UTR
Cre02.g088700 (1 of 781) IPR000104 - Antifreeze protein, type I outside_mRNA

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTACTGTTCTTGCCCTCAAGCTGGAGTTGTTCCCGGCCTCTCCTTGTTGG
Internal bar code:GAAGGCGTGATCGTTGTATGTA

Confirmation - LEAP-Seq

LEAP-Seq distance:2042
LEAP-Seq percent confirming:96.6102
LEAP-Seq n confirming:57
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:59

Suggested primers for confirmation by PCR

Suggested primer 1:ATTCCGTAGCAACCGTGTGT
Suggested primer 2:GAACTGTTCTGAAGCCCGGA