Insertion junction: CLIP2.068924_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.068924
Chromosome:chromosome 11
Location:1080574
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g467670 GT90F44,GT90-44 (1 of 52) PF05686 - Glycosyl transferase family 90 (Glyco_transf_90); GT90 family protein 44 3'UTR
Cre11.g467671 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCAGACTGCGCAGCTTAGCGACACACATCAAGCATCAACAGTTTAAGTG
Internal bar code:CTGAGTTAGTGCGAAGAGCTTG

Confirmation - LEAP-Seq

LEAP-Seq distance:1199
LEAP-Seq percent confirming:91.6667
LEAP-Seq n confirming:22
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:24

Suggested primers for confirmation by PCR

Suggested primer 1:AAACACTGCGCAAACGTCTC
Suggested primer 2:AGATAGAAATGGCGCGCGTA