Insertion junction: CLIP2.068927_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.068927
Chromosome:chromosome 12
Location:9650476
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g558353 (1 of 11) PF00999 - Sodium/hydrogen exchanger family (Na_H_Exchanger) 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTCGTGTCGTTGTGCCCGCCTTCCTGTCCGCCCCGTGCCCGCTGGTGCGG
Internal bar code:CCTTCATGACTTTGGGAATTAC

Confirmation - LEAP-Seq

LEAP-Seq distance:1039
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:32
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:32

Suggested primers for confirmation by PCR

Suggested primer 1:CATGTCACTTGTGGCGTGTG
Suggested primer 2:GGGCTGCTTCAACATGCTTC