Insertion junction: CLIP2.068928_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.068928
Chromosome:chromosome 9
Location:6387095
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g414600 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTGCGACTAGCCAACCGCCTATCTTGGGGAGTAACGGGGCTGCCCTAGGA
Internal bar code:GTGTGTGATTAGGGTTATAAGA

Confirmation - LEAP-Seq

LEAP-Seq distance:5394
LEAP-Seq percent confirming:84.2105
LEAP-Seq n confirming:16
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:19

Suggested primers for confirmation by PCR

Suggested primer 1:AATGGGGCTAGGACGGTAGT
Suggested primer 2:CCTACAACGCGGCATTCATG