Insertion junction: CLIP2.068929_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.068929
Chromosome:chromosome 9
Location:709539
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g404400 Sin3 complex component; (1 of 1) K14324 - histone deacetylase complex subunit SAP18 (SAP18) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGATGTCGCCCGGCATGCTGTCCCCACGCCTTCCTCCACTTGTCCCTCGC
Internal bar code:ACCGTAGATAGATTCACCTGAT

Confirmation - LEAP-Seq

LEAP-Seq distance:1415
LEAP-Seq percent confirming:96.0
LEAP-Seq n confirming:24
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:25

Suggested primers for confirmation by PCR

Suggested primer 1:CGGCTATGCGTGGTTGAATG
Suggested primer 2:GGCTGTTCGCGTTTCAAAGT