Insertion junction: CLIP2.068932_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.068932
Chromosome:chromosome 15
Location:717906
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre15.g637350 TRM3,TMG13 tRNA (guanosine-2'-O)-methyltransferase; (1 of 2) PTHR12029//PTHR12029:SF11 - RNA METHYLTRANSFERASE // METHYLTRANSFERASE TARBP1-RELATED 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAACTTGCGCTACTGACTGCCTACTCTCGTGCCGCCTGCAAGCCCACTCC
Internal bar code:GATTGCAGTCTGAGTTCAGGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:395
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:TGCTGTCTGCTTGGGGTATG
Suggested primer 2:TGTGTTAGTTGAGGTCGGGC