Insertion junction: CLIP2.068932_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.068932
Chromosome:chromosome 15
Location:717920
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre15.g637350 TRM3,TMG13 tRNA (guanosine-2'-O)-methyltransferase; (1 of 2) PTHR12029//PTHR12029:SF11 - RNA METHYLTRANSFERASE // METHYLTRANSFERASE TARBP1-RELATED 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCTCGTAACCGACGGTAAACGCTGTGGACGGCCGCGCCCATGGCTGGCG
Internal bar code:GCTATTTTGACAGGTGTCTTTT

Confirmation - LEAP-Seq

LEAP-Seq distance:3173
LEAP-Seq percent confirming:66.2338
LEAP-Seq n confirming:51
LEAP-Seq n nonconfirming:26
LEAP-Seq n unique pos:77

Suggested primers for confirmation by PCR

Suggested primer 1:TGTGTTAGTTGAGGTCGGGC
Suggested primer 2:TGCTGTCTGCTTGGGGTATG