Insertion junction: CLIP2.068939_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.068939
Chromosome:chromosome 5
Location:1512140
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g234657 (1 of 1) 2.7.7.87 - L-threonylcarbamoyladenylate synthase 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAGAATCGTGCTGGAATAGCTCGTTTATAGCGGCCTTACTCCAGTGAACA
Internal bar code:TATTGACAGTTAGTACGCGTCA

Confirmation - LEAP-Seq

LEAP-Seq distance:571
LEAP-Seq percent confirming:80.0
LEAP-Seq n confirming:12
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:15

Suggested primers for confirmation by PCR

Suggested primer 1:GTCACACGGCAGAGAGTTGA
Suggested primer 2:CGCCGTAAACAGTTGACGAC