Insertion junction: CLIP2.068940_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.068940
Chromosome:chromosome 2
Location:315322
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g075100 TPR3 (1 of 1) PTHR22904//PTHR22904:SF356 - TPR REPEAT CONTAINING PROTEIN // TETRATRICOPEPTIDE REPEAT PROTEIN 1; Tetratricopeptide-repeat protein 3 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCGCAACCACTTCCCCCTTCCCCTGTCTTGGTGTCAGCGATCGCGCATGC
Internal bar code:ATAACACCTTCGCCGTACGACG

Confirmation - LEAP-Seq

LEAP-Seq distance:1973
LEAP-Seq percent confirming:85.7143
LEAP-Seq n confirming:12
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:14

Suggested primers for confirmation by PCR

Suggested primer 1:ATGGGATGATGTGCCTGCAA
Suggested primer 2:CCCAAACCCCAATCCTCCTC