Insertion junction: CLIP2.068942_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.068942
Chromosome:chromosome 3
Location:8261608
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g199700 PGM11 (1 of 18) PF00300 - Histidine phosphatase superfamily (branch 1) (His_Phos_1); Phosphoglycerate mutase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCCTCAGACCCTCGGTCCAAGGTGTGTATTGGTGTAATGCATGTAGAAT
Internal bar code:AAGTAGTTCTCCGTCGCTGACC

Confirmation - LEAP-Seq

LEAP-Seq distance:967
LEAP-Seq percent confirming:92.8571
LEAP-Seq n confirming:13
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:14

Suggested primers for confirmation by PCR

Suggested primer 1:GAGGCAGTACTGGTGGTGAC
Suggested primer 2:ACACGAGCTGGAAAACGGAT