Insertion junction: CLIP2.068947_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.068947
Chromosome:chromosome 17
Location:2639539
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g716700 (1 of 77) IPR029071 - Ubiquitin-related domain 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCATTCATTCGTTGACATGCGGGTGTGCCTGAGCCCTATGTGCGGGGCA
Internal bar code:TGGACTCTCGGATGGGTCTATC

Confirmation - LEAP-Seq

LEAP-Seq distance:2464
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:65
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:65

Suggested primers for confirmation by PCR

Suggested primer 1:CAGTTGAGTTGCACCAACCG
Suggested primer 2:GCAATGCCCTTACTAAGCGC