Insertion junction: CLIP2.068958_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.068958
Chromosome:chromosome 7
Location:4688342
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g345001 (1 of 3) PF01936 - NYN domain (NYN) 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCGCCTGCTTTGCAAGACCGTGGCGTCCAGTGGCTTCCCGCTTAGCAACT
Internal bar code:GTCGTATGAATTGTTTGGGGCA

Confirmation - LEAP-Seq

LEAP-Seq distance:2742
LEAP-Seq percent confirming:96.9697
LEAP-Seq n confirming:32
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:33

Suggested primers for confirmation by PCR

Suggested primer 1:AGCGGCTACGTACATACAGC
Suggested primer 2:GTTGACGAGTTCAGAGGCCA