Insertion junction: CLIP2.068959_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.068959
Chromosome:chromosome 2
Location:7660259
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g147500 3'UTR
Cre02.g147550 (1 of 2) IPR009057//IPR017877 - Homeodomain-like // Myb-like domain 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGCCGTCCAGCCTAGGTCTGCGCTGTGCGTGAGGTGTCAGACCTGCCCT
Internal bar code:TCGGTCCGCGTGGTTTAGGTGT

Confirmation - LEAP-Seq

LEAP-Seq distance:822
LEAP-Seq percent confirming:59.6491
LEAP-Seq n confirming:34
LEAP-Seq n nonconfirming:23
LEAP-Seq n unique pos:57

Suggested primers for confirmation by PCR

Suggested primer 1:CCGCGCTTGTGATGTACATG
Suggested primer 2:GAAACCATGGCGCAAAGTGT