Insertion junction: CLIP2.068965_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.068965
Chromosome:plastome
Location:193151
Confidence (%):63
Locus systematic id Locus common name Defline Feature
CreCp.g802334 orf528 unknown ORF CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCTTTTGTAGAGAATTTTTTTCACTTGAACAAATGCCTCTAAAACAAAAA
Internal bar code:TTCGGCGGTACTACTATTCCTT

Confirmation - LEAP-Seq

LEAP-Seq distance:329
LEAP-Seq percent confirming:16.6667
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:20
LEAP-Seq n unique pos:24

Suggested primers for confirmation by PCR

Suggested primer 1:TGTGGTTAAGCTCGAACCCC
Suggested primer 2:CCACCTTCGTTGGAGCTTCT