Insertion junction: CLIP2.068967_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.068967
Chromosome:chromosome 10
Location:2577866
Confidence (%):40
Locus systematic id Locus common name Defline Feature
Cre10.g436650 HEL45 (1 of 1) PTHR24031//PTHR24031:SF181//PTHR24031:SF50 - RNA HELICASE // DEAD-BOX ATP-DEPENDENT RNA HELICASE 50 // DEAD/DEAH BOX RNA HELICASE FAMILY PROTEIN; DEAD/DEAH box helicase-related protein intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGTGGAGGACGGAATGATTACATAGCGATTGTGGGTGGGTACGGCGGGCA
Internal bar code:AATTCGTTACTGGGATCCGCTC

Confirmation - LEAP-Seq

LEAP-Seq distance:542
LEAP-Seq percent confirming:72.2222
LEAP-Seq n confirming:13
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:CGATCGGCTGTGCAAATCAG
Suggested primer 2:CTGCTTCCACGTCGCAATTC