Insertion junction: CLIP2.068968_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.068968
Chromosome:chromosome 4
Location:2449614
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g221750 (1 of 88) IPR011333 - POZ domain 5'UTR_intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACAGAGTAAGCGCCGACTCCAGTTCCCACTTGTACATAGACGCTTATCCG
Internal bar code:AGAGCCCTTAAAATTCTCCCTT

Confirmation - LEAP-Seq

LEAP-Seq distance:396
LEAP-Seq percent confirming:14.2857
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:12
LEAP-Seq n unique pos:14

Suggested primers for confirmation by PCR

Suggested primer 1:GGTTACAGGCTAACAGGCGT
Suggested primer 2:TTCTTACCCACGTGACCAGC