Insertion junction: CLIP2.068969_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.068969
Chromosome:chromosome 6
Location:1562410
Confidence (%):40
Locus systematic id Locus common name Defline Feature
Cre06.g261050 (1 of 28) 2.7.7.6 - DNA-directed RNA polymerase / RNA polymerase III intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGCCGCGGACACACTTGTACGCACACCTCCGCTTACTCTTTCTCAACCC
Internal bar code:GACGGGGTGTGAGAGTCGTGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:726
LEAP-Seq percent confirming:78.125
LEAP-Seq n confirming:25
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:32

Suggested primers for confirmation by PCR

Suggested primer 1:CACGGTGTACCTCATTGCCT
Suggested primer 2:TAGGGTATGTGTGGAGGGGG