Insertion junction: CLIP2.068975_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.068975
Chromosome:plastome
Location:61828
Confidence (%):40
Locus systematic id Locus common name Defline Feature
CreCp.g802289 ChreCp025,rps14,2716974 (1 of 1) K02954 - small subunit ribosomal protein S14 (RP-S14, MRPS14, rpsN); 30S ribosomal protein S14 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGTCCCTACTCGGAAGGAGAATGTTGCCCAGCAGAAATCGAAAATCAGT
Internal bar code:GGTCGCTTTGGATTAACTATGA

Confirmation - LEAP-Seq

LEAP-Seq distance:371
LEAP-Seq percent confirming:24.2424
LEAP-Seq n confirming:16
LEAP-Seq n nonconfirming:50
LEAP-Seq n unique pos:66

Suggested primers for confirmation by PCR

Suggested primer 1:AGCAACCTGTGTCCAACCAA
Suggested primer 2:GCGGTACCACTGCCACTAAT