Insertion junction: CLIP2.068996_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.068996
Chromosome:chromosome 16
Location:5957657
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g678850 (1 of 1) 2.3.3.10 - Hydroxymethylglutaryl-CoA synthase / Hydroxymethylglutaryl coenzyme alpha-condensing enzyme 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AAGCAAGTGTGGTTTTGTCGAGTTGGTGGTTCAGTGTGGTTCGCGAATGG
Internal bar code:AGGTCTTTCTTGCGGATCGTCT

Confirmation - LEAP-Seq

LEAP-Seq distance:1766
LEAP-Seq percent confirming:27.5862
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:21
LEAP-Seq n unique pos:29

Suggested primers for confirmation by PCR

Suggested primer 1:CAAGTTGGGCCCTGATAGCA
Suggested primer 2:AAAGGGGTTGGCATTGTGGA