Insertion junction: CLIP2.069005_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.069005
Chromosome:chromosome 3
Location:1413803
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g150850 (1 of 2) IPR002867//IPR013083//IPR031127 - IBR domain // Zinc finger, RING/FYVE/PHD-type // E3 ubiquitin ligase RBR family 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGCGAGGAAAGTGGAGATGTGAAGTGATTGCAGTTGGCACACATAGCAC
Internal bar code:TCATATCTGTGTTCAATGCATT

Confirmation - LEAP-Seq

LEAP-Seq distance:2224
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:25
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:25

Suggested primers for confirmation by PCR

Suggested primer 1:CTTCCTGTTTGCAACGGTGG
Suggested primer 2:TGCGTTGATCTTGTCCTGCT