Insertion junction: CLIP2.069010_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.069010
Chromosome:chromosome 12
Location:6534004
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g538000 EZY5 Early zygote expressed protein; (1 of 26) IPR001202 - WW domain 5'UTR
Cre12.g538050 (1 of 7) PF07004 - Sperm-tail PG-rich repeat (SHIPPO-rpt) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCATGAACGCTTCGACCCCATGCAGTAGAAGCTTTCAAGTTTGGGGCGCG
Internal bar code:TAAGGTAACTTGGGGGCGATGT

Confirmation - LEAP-Seq

LEAP-Seq distance:2291
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:89
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:89

Suggested primers for confirmation by PCR

Suggested primer 1:GAAAAGCGCCTGCATCGTAG
Suggested primer 2:CCTGCAGGTAAATGATGCGC