Insertion junction: CLIP2.069014_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.069014
Chromosome:chromosome 7
Location:2056820
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g800789 5'UTR_intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCATCCATCCTTTTTGTCATAGCCATGCTCGAGCCGCAGCGCAAGCTTA
Internal bar code:GAAGTGGGGCCAATGTTAGGAG

Confirmation - LEAP-Seq

LEAP-Seq distance:966
LEAP-Seq percent confirming:26.6667
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:11
LEAP-Seq n unique pos:15

Suggested primers for confirmation by PCR

Suggested primer 1:GAAAGCAACAGCAGACCAGC
Suggested primer 2:CAGACGCCTGTGGTGGTATT