Insertion junction: CLIP2.069018_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.069018
Chromosome:chromosome 3
Location:6070770
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre03.g190200 (1 of 1) IPR012351 - Four-helical cytokine, core 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCAAAGCCACCACACCAGATGTTTGGACACTGTAGTGAATTGGTGAACC
Internal bar code:GAATGACCGTCGGATCAAGCGC

Confirmation - LEAP-Seq

LEAP-Seq distance:709
LEAP-Seq percent confirming:70.8333
LEAP-Seq n confirming:17
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:24

Suggested primers for confirmation by PCR

Suggested primer 1:CTGTCGGCAGTTTGGTTGTG
Suggested primer 2:TCTGCAAAGTTTCGCCGTTG