Insertion junction: CLIP2.069027_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.069027
Chromosome:chromosome 12
Location:6344302
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g537100 TSV,TSV2 Valyl-tRNA synthetase; (1 of 1) PTHR11946//PTHR11946:SF5 - ISOLEUCYL, LEUCYL, TYROSYL, VALYL AND METHIONYL-TRNA SYNTHETASES // VALYL-TRNA SYNTHETASE, ISOFORM A 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGGGCTAAGGCTGGGCCGCTAGGCTGGGGCGTTCGGACCTCTGCTGACCT
Internal bar code:ATAGGGCCCTTCAGGGATGATC

Confirmation - LEAP-Seq

LEAP-Seq distance:1618
LEAP-Seq percent confirming:97.7273
LEAP-Seq n confirming:43
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:44

Suggested primers for confirmation by PCR

Suggested primer 1:GGCATCCAGGCTAAGCTCAA
Suggested primer 2:CTCCTTCACACACCCCAGTC