Insertion junction: CLIP2.069032_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.069032
Chromosome:chromosome 7
Location:5743559
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g353000 (1 of 52) 2.7.11.22 - Cyclin-dependent kinase / Cdk-activating protein kinase 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GACGCACGACTAAATTTTAGAGCTTGTATGGGGCGAGTAGCCCATGCGGG
Internal bar code:CAACATGGCAAATGGATTACGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1949
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:12
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:GGCAATCGGCGACATGTTAC
Suggested primer 2:GACTTCAAGCTGCCCTTCCT