Insertion junction: CLIP2.069035_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.069035
Chromosome:chromosome 9
Location:896068
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g403300 (1 of 1) K03144 - transcription initiation factor TFIIH subunit 4 (TFIIH4, GTF2H4, TFB2) 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGGCTGCAGAAGATTGTTTATGAGGAGACCCATGGTAACTATACTGTAG
Internal bar code:ATATGAATCCTAACAATAATTA

Confirmation - LEAP-Seq

LEAP-Seq distance:3532
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:50
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:50

Suggested primers for confirmation by PCR

Suggested primer 1:CGCTGACCTGCCTTAACTCA
Suggested primer 2:TCCTGAAAACGGCTAGGCAG