Insertion junction: CLIP2.069040_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.069040
Chromosome:plastome
Location:96650
Confidence (%):40
Locus systematic id Locus common name Defline Feature
CreCp.g802305 2716992,ChreCp041,rpoB2 (1 of 2) K03043 - DNA-directed RNA polymerase subunit beta (rpoB); RNA polymerase beta subunit II CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TATGTCCAATAGCTAATTCACCTCCAATACTTGAAGCACTATCAGCTAAT
Internal bar code:GCTTGTTGCAGTATGTTGTTTG

Confirmation - LEAP-Seq

LEAP-Seq distance:555
LEAP-Seq percent confirming:86.6667
LEAP-Seq n confirming:13
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:15

Suggested primers for confirmation by PCR

Suggested primer 1:AGATGTGACGCAGCCTTGAA
Suggested primer 2:TCAACAGCAGCTCCATCTGG