Insertion junction: CLIP2.069042_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.069042
Chromosome:chromosome 10
Location:2501046
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g435950 OPR47 OctotricoPeptide Repeat protein 47 5'UTR
Cre10.g436000 POC2 Proteome of centriole protein 2; (1 of 2) PTHR10877//PTHR10877:SF135 - POLYCYSTIN-RELATED // SUBFAMILY NOT NAMED 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGGTCTCAGTCGCCAACTGCGTGTCATAGTGATTGTACAGGTCGTCCAG
Internal bar code:ATCAAGTGTGCGCAGCACCTTG

Confirmation - LEAP-Seq

LEAP-Seq distance:397
LEAP-Seq percent confirming:95.4545
LEAP-Seq n confirming:21
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:22

Suggested primers for confirmation by PCR

Suggested primer 1:GGTTCGTGTTCAACTGCCAC
Suggested primer 2:CGTGTCGCCATACGGTATGA