Insertion junction: CLIP2.069043_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.069043
Chromosome:chromosome 4
Location:3956360
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g231516 (1 of 1) PTHR23315//PTHR23315:SF84 - BETA CATENIN-RELATED ARMADILLO REPEAT-CONTAINING // ANKYRIN AND ARMADILLO REPEAT-CONTAINING PROTEIN 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTCAGCTCCAATGGAAGTTTGCGCCCTTCAAGTGCGCGATCGATTCAATC
Internal bar code:CAGATGTCCCAAACGGTAGGCG

Confirmation - LEAP-Seq

LEAP-Seq distance:2582
LEAP-Seq percent confirming:68.1818
LEAP-Seq n confirming:15
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:22

Suggested primers for confirmation by PCR

Suggested primer 1:ATGAAGTGAAGTGCCGACGT
Suggested primer 2:CACGACCACCTCGATAGCTC