Insertion junction: CLIP2.069048_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.069048
Chromosome:chromosome 2
Location:5547707
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g115050 RSEP3,RSE3 (1 of 3) 3.4.24.85 - S2P endopeptidase / Sterol-regulatory element-binding proteins intramembrane protease; Intramembrane metalloprotease 3'UTR
Cre02.g115100 (1 of 1) IPR000945//IPR001810//IPR020683 - Dopamine beta-hydroxylase-related // F-box domain // Ankyrin repeat-containing domain 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAAGCGGTGACCCGGCGAGCATATTTAAAAGTACATGAAGCAAATACACG
Internal bar code:TCGGCCTGTAGTAAACGTCCAG

Confirmation - LEAP-Seq

LEAP-Seq distance:3424
LEAP-Seq percent confirming:92.1053
LEAP-Seq n confirming:70
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:76

Suggested primers for confirmation by PCR

Suggested primer 1:CGTACTTATTTGCGGCGTGG
Suggested primer 2:AAGAGTTGTGAGGCACGGAG