Insertion junction: CLIP2.069049_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.069049
Chromosome:chromosome 2
Location:2449380
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre02.g091550 WHI,EZY18,PBF2 (1 of 1) PTHR31745:SF1 - SINGLE-STRANDED DNA-BINDING PROTEIN WHY2, MITOCHONDRIAL; Whirly domain protein intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGGCCGTCACGTCATGTCCCTTTCCACGCCCACTGCAGGCGCCCGTCCC
Internal bar code:TTCGAGTGAAACAGATGTCGCG

Confirmation - LEAP-Seq

LEAP-Seq distance:116
LEAP-Seq percent confirming:5.55556
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:17
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:TTAGGCTTAGGGGCAGGAGT
Suggested primer 2:TGGCATGAGGGCTGCATTTA