Insertion junction: CLIP2.069055_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.069055
Chromosome:chromosome 12
Location:1079076
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g491550 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTCGATGCACTCAACACACAACATGATTGTCCCGGGCCTGTGCCGTGTCC
Internal bar code:TCCAAAAAGGTGGGGGTTCCGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1078
LEAP-Seq percent confirming:81.25
LEAP-Seq n confirming:13
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:CGTGTGTCAAACAGCACTGG
Suggested primer 2:GGAAATGGCTCGGGACAGAA