Insertion junction: CLIP2.069058_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.069058
Chromosome:chromosome 5
Location:1515430
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g234658 (1 of 1) PTHR13480:SF0 - E3 UBIQUITIN-PROTEIN LIGASE HAKAI 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CACGCCTCGACACTTTCAGCGCGCGCACACACACGGTAGCACACGGGCTG
Internal bar code:GCACATAGGTTAGCAGGAAGGC

Confirmation - LEAP-Seq

LEAP-Seq distance:2405
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:TGTGATGTCGGTGATGGGTG
Suggested primer 2:AGGGGATGTTGGAATGCTGG