Insertion junction: CLIP2.069064_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.069064
Chromosome:plastome
Location:122876
Confidence (%):40
Locus systematic id Locus common name Defline Feature
CreCp.g802313 rbcL,ChreCp049,2717040 (1 of 1) K01601 - ribulose-bisphosphate carboxylase large chain (rbcL); RuBisCO large subunit CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATCGTAACAACGACCTTTGTAACGGTCAAGACTTGTTAAACCGTCAGTCC
Internal bar code:ACTGCTCTACGGCGTGCCATTC

Confirmation - LEAP-Seq

LEAP-Seq distance:172
LEAP-Seq percent confirming:80.0
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:TCGCTTATCCCCTGACAGGA
Suggested primer 2:GCCAACGCATGAATGGTTGT