Insertion junction: CLIP2.069076_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.069076
Chromosome:chromosome 10
Location:3260764
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g442700 RVB2,RUVBL2,Reptin Nucleoside-triphosphatase, RuvB-like protein; (1 of 1) K11338 - RuvB-like protein 2 [EC:3.6.4.12] (RUVBL2, RVB2, INO80J) 3'UTR
Cre10.g442750 (1 of 1) K19045 - E3 ubiquitin-protein ligase BIG BROTHER and related proteins [EC:6.3.2.19] (BB) 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCTTCGCCAGGCGAATTGCCCATAATTCCCTGTCAAGGCCTGCGAGCAG
Internal bar code:CCGCCTGCATAAATTGTTTTCA

Confirmation - LEAP-Seq

LEAP-Seq distance:3880
LEAP-Seq percent confirming:94.8718
LEAP-Seq n confirming:37
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:39

Suggested primers for confirmation by PCR

Suggested primer 1:TCCTCGTGTGCTGTTTCCTC
Suggested primer 2:GCGGTGCCGTATCCTATTCA