Insertion junction: CLIP2.069077_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.069077
Chromosome:chromosome 5
Location:1038092
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g247500 (1 of 2) IPR001841//IPR013083//IPR018957 - Zinc finger, RING-type // Zinc finger, RING/FYVE/PHD-type // Zinc finger, C3HC4 RING-type 3'UTR
Cre05.g247550 GST7 (1 of 1) PTHR11260:SF220 - GST-CONTAINING FLYWCH ZINC-FINGER PROTEIN; Glutathione S-transferase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTTAACGCTACAAAAGGCGGCGAATGATTTCAGTTGTGGGACCTGGCGGG
Internal bar code:ATTCGCGTTATCTCAGATAAAA

Confirmation - LEAP-Seq

LEAP-Seq distance:2638
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:48
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:48

Suggested primers for confirmation by PCR

Suggested primer 1:TCTGGCACGGTACAAGACAC
Suggested primer 2:CACACACATGTCGCAACCTG