Insertion junction: CLIP2.069099_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.069099
Chromosome:chromosome 4
Location:4038913
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g232502 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCTTGCAGCGCTGCCAGACACACGCCGGAGGAAGCTTTACCACGCCCCT
Internal bar code:AGTGGTCTGACGTTTACTCGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1120
LEAP-Seq percent confirming:75.0
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:AACGTTGGCAAGGTGGAGAA
Suggested primer 2:CCGTTCAAGGAACTGGAGCT