Insertion junction: CLIP2.069100_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.069100
Chromosome:chromosome 3
Location:1152540
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g149150 (1 of 1) IPR000104//IPR013022 - Antifreeze protein, type I // Xylose isomerase-like, TIM barrel domain 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATTGCGTCCAGGGTGTCATGGAAGTAAGCCGAGGACTAAGACATTTGCCT
Internal bar code:ACGATGGCTGGGGCCTTACATC

Confirmation - LEAP-Seq

LEAP-Seq distance:1397
LEAP-Seq percent confirming:94.4444
LEAP-Seq n confirming:17
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:ATCATGTTTGATCGCGCAGC
Suggested primer 2:CCGCAAACAGCTCATCATCG