Insertion junction: CLIP2.069105_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.069105
Chromosome:chromosome 3
Location:7538947
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre03.g205300 EXN7 (1 of 1) IPR000104//IPR002562//IPR012337 - Antifreeze protein, type I // 3'-5' exonuclease domain // Ribonuclease H-like domain; 3'-5' exonuclease CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGGAAGCAGCGGCCGCTGACGCCTGCCATGATCGAGTACGCGGTGCAGG
Internal bar code:CCCCGGCGAATGCACAGCAGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:314
LEAP-Seq percent confirming:86.6667
LEAP-Seq n confirming:26
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:30

Suggested primers for confirmation by PCR

Suggested primer 1:CTCCTCCTTCATCCCCTCCA
Suggested primer 2:AGTACGACCAAATCACGCGT