Insertion junction: CLIP2.069111_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.069111
Chromosome:chromosome 9
Location:1025848
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g402100 outside_mRNA

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTGGAGGTGAAGCCACGTCTTCGGTTGGTCCCCAGGAAGCAATGGCAGTG
Internal bar code:CGTGCCATTATCGTCTACATTC

Confirmation - LEAP-Seq

LEAP-Seq distance:1214
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:23
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:23

Suggested primers for confirmation by PCR

Suggested primer 1:CTTTCAGTTGCAGGTGTGGC
Suggested primer 2:GAAGGAAGGCAGCAGAGGAG